BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F06LP1|AL425153
(630 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1156 0.0
3x_Contig1461 620 e-177
>3x_Contig1530
Length = 6216
Score = 1156 bits (582), Expect = 0.0
Identities = 605/610 (99%), Gaps = 3/610 (0%)
Strand = Plus / Plus
Query: 21 taccatccgctggattatkgctgaacgcctctaagtcatgaatccatgctagaacgcgat 80
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5125 taccatccgctggattatggctgaacgcctctaagtca-gaatccatgctagaacgcgat 5183
Query: 81 gatttctttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtcgctg 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5184 gatttctttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtcgctg 5243
Query: 141 aaccatagcaggctggcaacggtgctcttagcggaaaggctttgggtgcttgccggcgaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5244 aaccatagcaggctggcaacggtgctcttagcggaaaggctttgggtgcttgccggcgaa 5303
Query: 201 ttgcaatgtcattttgcgcaaggataaatcatttgtatacgacttaaatgtacaacaggg 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5304 ttgcaatgtcattttgcgcaaggataaatcatttgtatacgacttaaatgtacaacaggg 5363
Query: 261 tattgtaagcagtagagtatgccttgttgttacgatctgctgagattaagccttcgttgt 320
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5364 tattgtaagcagtagagta-gccttgttgttacgatctgctgagattaagccttcgttgt 5422
Query: 321 ctgatttgttactttctaggttggtggaatgacaggtgtcttctccgatgtagagattaa 380
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5423 ctgatttgttactttctaggttggtggaa-gacaggtgtcttctccgatgtagagattaa 5481
Query: 381 ttaattgattgacttttttattttatgatgtctttatattttacattacttaaaaccact 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 ttaattgattgacttttttattttatgatgtctttatattttacattacttaaaaccact 5541
Query: 441 ttcttcgttctcttttgaagctacctgagactttttgttgttttctttctctataaagta 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 ttcttcgttctcttttgaagctacctgagactttttgttgttttctttctctataaagta 5601
Query: 501 tttgattatttgattattagattattattatcatcatcgcatcgacatttgttttttttt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 tttgattatttgattattagattattattatcatcatcgcatcgacatttgttttttttt 5661
Query: 561 ttttttttttttttttttgtcgctggatatattattttwttctagttttttgttaaacta 620
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5662 ttttttttttttttttttgtcgctggatatattattttattctagttttttgttaaacta 5721
Query: 621 ctttttaaga 630
||||||||||
Sbjct: 5722 ctttttaaga 5731
>3x_Contig1461
Length = 5478
Score = 620 bits (312), Expect = e-177
Identities = 341/350 (97%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 281 gccttgttgttacgatctgctgagattaagccttcgttgtctgatttgttactttctagg 340
||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 5008 gccttttttttacgatctgctgagattaagcccccgttgtctgattttttactttctagg 4949
Query: 341 ttggtggaatgacaggtgtcttctccgatgtagagattaattaattgattgactttttta 400
|||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4948 ttgggggaa-gacaggtgtcttccccgatgtagagattaattaattgattgactttttta 4890
Query: 401 ttttatgatgtctttatattttacattacttaaaaccactttcttcgttctcttttgaag 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4889 ttttatgatgtctttatattttacattacttaaaaccactttcttcgttctcttttgaag 4830
Query: 461 ctacctgagactttttgttgttttctttctctataaagtatttgattatttgattattag 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4829 ctacctgagactttttgttgttttctttctctataaagtatttgattatttgattattag 4770
Query: 521 attattattatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4769 attattattatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgt 4710
Query: 581 cgctggatatattattttwttctagttttttgttaaactactttttaaga 630
|||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4709 cgctggatatattattttattctagttttttgttaaactactttttaaga 4660
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,129
Number of Sequences: 1807
Number of extensions: 27129
Number of successful extensions: 8604
Number of sequences better than 1.0e-20: 2
length of query: 630
length of database: 10,358,551
effective HSP length: 16
effective length of query: 614
effective length of database: 10,329,639
effective search space: 6342398346
effective search space used: 6342398346
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)